Adaptive response

The adaptive response is a specific chemical process undergone by the bacteria Escherichia coli, also known as E. coli. E. coli is naturally found in the digestive tract of many living organisms, where it assists with the process of converting food into fuel. However, when ingested orally, many strains of E. coli can cause severe infection or death.

E. coli exhibits a notable response when exposed to alkylating agents. Alkylating agents normally damage or destroy bacteria, and are commonly used in sterilization. However, once exposed to low levels of alkylating agents, E. coli develops a resistance to high levels of alkylating agents. This process is called the adaptive response.

Alkylating agents can also cause damage to E. coli’s DNA, interfering with its ability to reproduce effectively. However, scientists have identified four E. coli genes that work to repair the DNA damage inflicted by the alkylating agents. This gives the bacteria a resistance to the effects of sterilization solutions based on alkylating agents. The process behind E. coli’s adaptive response is not wholly understood. Scientists understand some of the mechanisms by which the bacteria repairs damage to its DNA. However, they do not understand the roles of several genes involved in the process.

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Background

Escherichia coli is a type of bacteria commonly found in the intestines of humans and animals. The presence of many strains of E. coli in the intestines is necessary for proper digestive function. Many strains of the bacteria are even harmless if ingested by humans. However, some strains of the bacteria can cause severe illness if they are allowed to contaminate food or water. These strains are commonly referred to as Shiga toxin-producing E. coli, or STEC.

Some strains of E. coli can cause particularly severe symptoms when ingested by humans. These symptoms include bleeding, confusion, seizures, fever, and kidney failure. They may also include typical symptoms of food poisoning, such as severe cramps, vomiting, and diarrhea. In extreme cases, these infections may result in death.

One common method by which people ingest STEC is by eating infected meat. During the process of butchering an animal, sometimes the animal’s intestines rupture and the bacteria comes into contact with the consumable parts of the animal. In most cases, this bacteria is killed during the cooking process. However, if infected meat is served undercooked, the dangerous bacteria might survive until the meat is eaten. Similarly, consuming unpasteurized milk can lead to the ingestion of STEC.

In rare cases, individuals might ingest STEC from swallowing infected water. This most commonly occurs in pools, lakes, and ponds. However, it might also occur when people eat fruit and vegetables that have been washed with contaminated water.

Though E. coli outbreaks are initially caused by someone ingesting the bacteria, the infection can be spread from person to person. People suffering from the severe symptoms caused by STEC are at risk of infecting others. For example, if a child becomes infected, parents caring for the child must be extremely careful not to contract the illness as well.

Overview

E. coli bacteria has been shown to exhibit unique responses to threats and DNA damage. For example, when E. coli cells are exposed to low levels of alkylating agents for extended periods of time, the cells may become extremely resistant to the damage typically caused by high levels of alkylating agents. This process is commonly referred to as the adaptive response to alkylation damage, or simply the adaptive response.

Alkylating agents are a group of powerful chemicals commonly used as disinfectants. They are typically used to kill bacteria, viruses, fungi, and endospores. For this reason, alkylating agents are often used in solutions to disinfect medical equipment, or to sterilize other equipment at low temperatures. Understanding how alkylating agents interact with E. coli bacteria is important for effective sterilization.

Most cells experience damage to their DNA when exposed to alkylating agents. This can cause epigenetic changes to the cells, mutations, and rapid cell death. Some types of living organisms, such as E. coli, have adapted means to reduce or eliminate this damage. They have developed a specialized resistance to the sterilizing effects of the alkylating agents.

Scientists have identified four genes as responsible for the development of E. coli’s adaptive response: ada, alkA, alkB, and aidB. The ada protein works to remove the alkyl groups from the cell and regulates the activation of the adaptive response, while the alkA protein repairs damage inflicted by alkylating agents. Though scientists are aware that alkB and aidB play some role in the process of E. coli’s adaptive response, they are unsure of the proteins’ specific roles.

E. coli’s adaptive response does not prevent alkylating agents from causing damage to the cell. Instead, it works to repair damage to DNA as it occurs. The protein alkB uses chemical oxidation to remove and repair the lesions that alkylation causes to E. coli’s DNA. The protein is able to fully repair some types of damage and partially repair other types of damage. For this reason, the adaptive response makes certain types of E. coli bacteria resistant to alkylating agents, but not immune. The adaptive response has also been shown to repair errors in DNA replication that might occur naturally, allowing the bacteria to reproduce with less risk of mutation.

Thought the adaptive response is not fully understood, some scientists hope that it may provide medical professionals with additional tools in the future. They believe that further study will provide scientists with a greater insight into the process by which E. coli bacteria repair damage to DNA. This could provide scientists with a better understanding of how to prevent or repair DNA damage in other organisms.

Bibliography

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Mahilkar, Anjali, et al. "Experimental Evolution of Anticipatory Regulation in Escherichia Coli." Frontiers in Microbiology, 10 Jan. 2022, doi.org/10.3389/fmicb.2021.796228. Accessed 7 Nov. 2024.

“Molecular Signal for Induction of the Adaptive Response to Alkylation Damage in Escherichia Coli.” Imperial Cancer Research Fund, jcs.biologists.org/content/joces/1987/Supplement‗6/215.full.pdf. Accessed 11 Sept. 2020.

Poncin, Katy, et al. “Occurrence and Repair of Alkylating Stress in the Intracellular Pathogen Brucella Abortus.” Nature, 2019, www.nature.com/articles/s41467-019-12516-8. Accessed 11 Sept. 2020.

Somma, Angela Di. “Characterization of the Proteins Involved in the DNA Repair Mechanism in M. Smegmatis.” International Journal of Molecular Sciences, 2020, www.ncbi.nlm.nih.gov/pmc/articles/PMC7432924/. Accessed 11 Sept. 2020.

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